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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907297.1_cds_XP_016457438.1_51157
CDS Infomation

[gene=LOC107781267] [db_xref=GeneID:107781267] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1.2] [protein_id=XP_016457438.1] [location=join(53102..53472,54428..54749,55696..55839)] [gbkey=CDS]
Sequence

ATGGAATCCCAAAGAGTCATTCCTGTTATCAGATTTAGCCAAGAAAACATGAGCCCAAGT
TCAAGTTGTTGGGTTTCAACATGCCAAGATGTTCGAAAAGCTTTCGAAATCTATGGCTGT
TTCTTAGCAATCTATGAAGAAATTTCAATGGAGCTATGTAAACAAGTTTTCCAGGCAGTG
GAGAAGTTGTTTGATTTACCTGTGGAAACAAAAGCTAAAAACACTTCGACAATTCCTAAT
TTTGGTTATATTGGACCAGAATCCGACACTCGGCCTCTTTATGAAAGCATGGGAATTGAG
AATGCCGTCAATCTTGAATCAGTTCAAAGCTTCACAAATGTCATGTGGCCCTCTGGAAAT
ACTCATTTTTGTGGACTACTTCATTCCCATTCAAAGCAATTGATGGAACTAGACAACATG
GTGACTAAAACGATGTTTGCAAGTTATGGTGTGGAGAAACATCATGAATTGTGTGTTAAA
TCTAAGGGTAACCTTGTTCGTGTCATGAAATATGGAGTTCCAAAGTCCGATGGGCCTAAC
ATTGGTCTTCCACCTCATTGTGACAAGGGCTTCATTACTATACTCCATCAAAATCAAGTA
AATGGTTTGGAGATCGAAACAAAGGATGGTCATTGGATTTCTGTTGAATTTCCTCCTTCA
TCCTTTATTGTTATCGCAGGTGATGCACTTAAGGAATGGAGCAACGATAGAGTACATGCT
GTTACACATAAAGTTACAATGAGTGGAAATGAATCAAGATATTCACTTGGGCAATTTTCA
CATCCAATGAAGATAGGAACACTAGAAGAGCTCATTGCTTCATCCTCTGCAGTTTAA

Peptide Sequence

PEP ID

XP_016457438.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1.2 [Nicotiana tabacum]
Sequence

MESQRVIPVIRFSQENMSPSSSCWVSTCQDVRKAFEIYGCFLAIYEEISMELCKQVFQAV
EKLFDLPVETKAKNTSTIPNFGYIGPESDTRPLYESMGIENAVNLESVQSFTNVMWPSGN
THFCGLLHSHSKQLMELDNMVTKTMFASYGVEKHHELCVKSKGNLVRVMKYGVPKSDGPN
IGLPPHCDKGFITILHQNQVNGLEIETKDGHWISVEFPPSSFIVIAGDALKEWSNDRVHA
VTHKVTMSGNESRYSLGQFSHPMKIGTLEELIASSSAV

Transcript Sequence

Gene sequence data has not been registered.